#!/usr/bin/env bash
find ./remote/timedump -type 'f' -iregex '.*case' | while IFS="" read -r p || [ -n "$p" ]
do
    N=$(dirname "$p")/$(basename -s .case "$p")
    T="${N}_case.trace.ron"
    P="${N}_case"
    echo $N
    if [ ! -f "$T" ]; then
        snakemake -c1 "$T"
    fi
    if [ ! -f "$P.html" ]; then
        ~/code/FRET/state2gantt/driver.sh "$T"
    fi
done