15 lines
371 B
Bash
15 lines
371 B
Bash
#!/usr/bin/env bash
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find ./remote/timedump -type 'f' -iregex '.*case' | while IFS="" read -r p || [ -n "$p" ]
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do
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N=$(dirname "$p")/$(basename -s .case "$p")
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T="${N}_case.trace.ron"
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P="${N}_case"
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echo $N
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if [ ! -f "$T" ]; then
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snakemake -c1 "$T"
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fi
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if [ ! -f "$P.html" ]; then
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~/code/FRET/state2gantt/driver.sh "$T"
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fi
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done
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